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The Universe of Genetic Testing

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The BasicsDNA double helix

The total of an individual's genetic information is called their genome. The genome consists of structures called chromosomes that are composed of very long double strands of DNA. Each human cell contains 23 pairs of chromosomes. One-half of each pair is inherited from an individual's mother and the other half of the pair is inherited from an individual's father. Twenty-two of the 23 pairs of chromosomes are called autosomes; the other pair is composed of the X and Y sex chromosomes. The sex chromosomes determine a person's sex; normal males have one X and one Y chromosome while normal females have two X chromosomes.

Chromosomes are located in the part of the cell called the nucleus. The long, double strand of DNA (sometimes called "nuclear DNA") contained in each chromosome is organized into many subunits of genetic information, with each subunit referred to as a gene. Genes are made up of nucleotides, which are composed of phosphates, a sugar, and a nitrogen-containing base.  There are four bases in DNA: adenine, guanine, thymine, and cytosine. It is the difference in the arrangement of these bases on each strand of DNA that leads to the uniqueness of each person's genetic makeup. The arrangement of the bases in each gene is used to produce RNA, which in turn produces a protein. There are some 30,000-50,000 genes in a human genome, and expression of these genes leads to the production of a large number of proteins that make up our bodies.

There is also a tiny bit of DNA that is not located in a cell's nucleus but in the mitochondria that are located in the cytoplasm of every cell. Mitochrondria are very important cellular structures involved in the basic functioning of cells, and they contain their own circular piece of DNA. This DNA is called "extra-nuclear DNA" or more simply "mitochrondrial DNA," and it in part makes the proteins that are needed by the mitochrondria to function properly.

A person's genotype is their genetic identity, the specific combination of genes that they have in their cells. This does not show in terms of outward appearances. Observable traits or characteristics, such as hair color or height, are considered a person's phenotype. Phenotype is the physical expression of the genotype. People's phenotypes are different because their genotypes are different. Although human genotypes are alike in many ways, small differences make us unique beings in both appearance and genetic makeup. These differences are called polymorphisms.

Genetic polymorphisms in both nuclear DNA and mitochrondrial DNA help to identify us as individuals. Sometimes, but not always, these differences in our genotype are related to disease or to the inability to metabolize or break down drugs normally. These kinds of polymorphisms are called genetic variations, or mutations, and they are either inherited or they can occur spontaneously. Some of these genetic variations occurred over time in an attempt by our bodies to protect us from disease. These variations will be discussed under the specific Conditions/Diseases that have a genetic component, such as cystic fibrosis. Sometimes only one nucleotide in a gene is different, and this is referred to as a "single-nucleotide polymorphism." This will be explained in greater detail in the section on Clinical Genetic Testing. It is important to remember that not all genetic variations, or mutations, are bad or lead to disease.

Patterns of Inheritance
There are several ways in which an individual's polymorphisms are inherited. These are called "patterns of inheritance" and result in the transmission of a polymorphism or mutation from one generation to the next.

One pattern is referred to as autosomal dominant, in which the transmission of a single copy of a gene on one of the autosomal chromosomes is sufficient to cause a certain trait to appear (such as eye color or a specific disease). The gene may be inherited from either an individual's mother or father. Individuals with an autosomal dominant trait or disease have a 50-50 chance of passing the polymorphic gene on to their children. Examples of autosomal traits are brown eyes and the ability to roll one's tongue; examples of autosomal dominant diseases are familial hypercholesterolemia and Huntington disease.

An unusual concept of dominant genes is referred to as co-dominance, in which the genes on both chromosomes are expressed together. An example of this is the blood type AB, in which the A antigen protein and the B antigen protein are both located on an individual's red blood cells.

A second pattern of inheritance is termed autosomal recessive and requires inheritance of two genetic variant copies of the same gene, one copy being inherited from an individual's mother and the second copy being inherited from an individual's father, for the trait to appear or the disease to develop. If the individual inherits only one of the variant genes, he or she will not develop the disease but instead will be a carrier, much like his or her parent, and can in turn pass the variant gene on to his or her children. An example of an autosomal recessive trait would be blue eyes; examples of autosomal recessive diseases include cystic fibrosis, sickle cell anemia, and hemochromatosis.

There are also patterns of inheritance in which the variant gene resides on either the X or Y sex chromosome and these are referred to as sex-linked patterns of inheritance. With X-linked recessive diseases, a female carries the abnormal gene on one of her two X chromosomes, but because she possesses one normal copy of the gene, she is not affected. However, since males have only one X chromosome, a single abnormal copy of the recessive gene on his X chromosome (inherited from his mother) is sufficient to cause the disease. Examples include Duchenne's muscular dystrophy and hemophilia. If a disease is X-linked dominant, a single abnormal gene on the X chromosome can cause that disease to develop so that a female is affected and the condition is often lethal in males. This is a rare pattern of inheritance.

It is interesting to note that mitochondrial DNA (or "extra-nuclear DNA") is inherited only from our mothers. This is referred to as a "maternal mode" of inheritance.

There are many factors that may obscure or complicate inheritance patterns. These factors in turn affect the way a gene is inherited or expressed.

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